Giulia Guidi @giuliaguidi Twitter profile | Pikagi

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Giulia Guidi

@giuliaguidi

2,478

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624

Following

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@CornellCIS Assistant Professor | @LBNLcs Affiliate Faculty | @UCBerkeley PhD | Distributed & Parallel Computing (HPC) | Dogs, Skis, Pottery | she/her

Ithaca, NY

https://t.co/A89xjTarHM

Joined February 2010

Don't wanna be here? Send us removal request.

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@giuliaguidi

Giulia Guidi

10 months

I am honored to receive this award and I would like to thank all those who have contributed their time, effort and enthusiasm to support my work, especially @aydoz and @KathyYelick . Thank you, @CornellCIS , for the amazing support I have received in my first year as a faculty!

@Cornell_CS

Cornell Computer Science

10 months

Congrats to @GiuliaGuidi , assistant professor of computer science at @CornellCIS , on winning the SIAM 2024 Supercomputing Early Career Prize! 👏👏 Guidi was selected for her “pioneering works bridging high-performance computing and computational biology."

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@giuliaguidi

Giulia Guidi

2 years

“One day you’ll be my colleague”, told me a professor during my master’s defense, I laughed—but he was right. I’m beyond happy and excited to say that starting next Spring I‘ll be part of the @Cornell family as an Assistant Professor of Computer Science at @cs_cornell ! 1/n

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@giuliaguidi

Giulia Guidi

7 months

This semester, two students have told me that they have fallen in love with HPC because of my course and want to pursue a career in HPC, and that is one of the absolute best parts of my job!

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@giuliaguidi

Giulia Guidi

2 years

@astrowizicist This happened to me too — but I didn't realize it until 2 days later when I thought my car had been stolen.

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@giuliaguidi

Giulia Guidi

3 years

I’m thrilled to say I passed my qualifying exam yesterday and I’m officially a PhD candidate in Computer Science at @UCBerkeley —Thank you so much to my committee for the fruitful discussion and invaluable feedback @joe_hellerstein @DanRokhsar @aydoz @KathyYelick 1/n

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@giuliaguidi

Giulia Guidi

2 years

I just submitted my first grant as a PI 🥲

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@giuliaguidi

Giulia Guidi

3 years

It was a late afternoon of my first week of work —my advisor stopped by my desk, drew the routes to his favorite brewery and coffee shop on a piece of paper and told me to leave (then I knew it was a good fit).

@bielleogy

Dr. Elinne Becket - @bielleogy on all platforms

3 years

I had to fire my grad student tonight, for being in lab so late. She's re-hired tomorrow, but tonight she needs to clear out and go get dinner.

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@giuliaguidi

Giulia Guidi

2 years

PhD Graduation Ceremony | @UCBerkeley Engineering Commencement — May 18, 2022

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@giuliaguidi

Giulia Guidi

3 years

I'm super happy to receive the 2022 Outstanding Graduate Student Instructor Award from the @UCBerkeley GSI Teaching and Resource Center. I truly enjoyed my time as TA (GSI) for Applications of Parallel Computers—thank you to @aydoz , @KathyYelick , and Jim Demmel for nominating me!

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@giuliaguidi

Giulia Guidi

2 years

Being a prof is like being a grad student but every day there’s a deadline (or more)

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@giuliaguidi

Giulia Guidi

3 years

A PhD applicant just emailed me to thank me for the guidance offered through the EAAA program (UCB) and follow up 1-1 interaction—they have been admitted to a top school program! I can’t think of a better way to start the weekend than “thank you for being an amazing guide”.

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@giuliaguidi

Giulia Guidi

3 years

I recently asked a professor what would make a young faculty successful (but could apply to anyone really) and they said “You should have fun! If one is having fun, the chances they’re doing a terrible job are low”—and I have been thinking about that a lot.

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@giuliaguidi

Giulia Guidi

2 years

If you’re looking for some summer reading, are bored of the usual stuff, and are looking for some real drama (kidding), here’s my PhD dissertation: Officially Dr. Guidi—Got also my spot on @CornellCIS ’s website!

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@giuliaguidi

Giulia Guidi

4 years

I'm so happy to announce that the Equal Access to Application Assistance Program at @Berkeley_EECS is now accepting applications! The Equal Access to Application Assistance Program is aimed at assuring all students have someone to review their application before submission. 1/n

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@giuliaguidi

Giulia Guidi

2 years

Got my first tiny grant today for curriculum development from @intel — Yay!

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@giuliaguidi

Giulia Guidi

2 years

Ciao, today I spoke at the @CornellCIS Lunch and Learn seminar on the CS academic job search (mainly research track and US market or US-like market). I'm happy to share my slides here in case they might be helpful to other people! PDF: 1/2

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@giuliaguidi

Giulia Guidi

4 years

This is terrific —I’m honored to be one of the 2020 SIGHPC Computational & Data Science Fellows! I must thank my advisors ( @aydoz and @KathyYelick ) and my colleagues for not only supporting me but also challenging and motivating me every day.

@SIGHPC

ACM SIGHPC

4 years

Congratulations to the 2020 SIGHPC Computational & Data Science Fellows! These 12 students are bright, curious, and motivated to change the world. They will be recognized at the awards ceremony at SC20.

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@giuliaguidi

Giulia Guidi

3 years

Hi all prospective grad students! I’m a proud co-organizer of the Equal Access to Application Assistance (EAAA) program at @Berkeley_EECS and I’m happy to announce that the 2021 edition is now accepting applications! Deadline: Oct 15, 2021 —Apply here:

PURPOSE

sites.google.com

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@giuliaguidi

Giulia Guidi

5 years

Our updated preprint is out! BELLA computes overlap detection as an efficient sparse matrix-matrix multiplication kernel. BELLA also introduces techniques from probability theory and high-performance computing not commonly used in sequence analysis.

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BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and Overlapper

Recent advances in long-read sequencing enable the characterization of genome structure and its intra- and inter-species variation at a resolution that was previously impossible. Detecing overlaps...

www.biorxiv.org

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@giuliaguidi

Giulia Guidi

2 years

It's a dark time, as my dog Sieger passed away unexpectedly earlier this week from an aggressive tumor—those who knew him know how special he was. I miss him terribly and he'll never be replaced. He accompanied me through grad school and offered me inimitable support and love.

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@giuliaguidi

Giulia Guidi

11 months

I’m honored to be the winner of the @issnaf Mario Gerla award. Professor Gerla's legacy is an inspiration, and I’m determined to continue in his spirit—I look forward to pushing the boundaries of HPC and using computation to work toward a better future for science and medicine.

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@giuliaguidi

Giulia Guidi

1 year

Yay! Our paper “Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU” has been accepted to @Supercomputing 2023💥 📄 preprint:

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Space Efficient Sequence Alignment for SRAM-Based Computing:...

Dedicated accelerator hardware has become essential for processing AI-based workloads, leading to the rise of novel accelerator architectures. Furthermore, fundamental differences in memory...

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@giuliaguidi

Giulia Guidi

2 years

Gave my first lecture at Cornell today — I wish my students were right about HPCG!

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@giuliaguidi

Giulia Guidi

9 months

A recent study has shown that academics spend on average 50% of their working time dual authenticating into stuff.

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@giuliaguidi

Giulia Guidi

2 years

If you’re applying to grad school and interested in parallel computing for sciences, please consider applying to @cs_cornell and mentioning me in your application!

@giuliaguidi

Giulia Guidi

2 years

Here until Friday! Then, here until undefined starting January!

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@giuliaguidi

Giulia Guidi

2 years

@MIT_CSAIL That was not supposed to work

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@giuliaguidi

Giulia Guidi

2 years

friend: congratulations! how are you gonna celebrate? me: writing a grant proposal due in early May friend: ...

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@giuliaguidi

Giulia Guidi

3 years

Turns out the people who said it was stressful to apply for faculty positions were not being overly dramatic — Nonetheless, I am happy and excited to announce that I have decided to go on the academic job market this year! 💃 1/n Tips, job postings, and hugs are welcome!

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@giuliaguidi

Giulia Guidi

2 years

In Berkeley we do it in reverse—I'll give my dissertation talk this Friday 10am PDT. If you'd like to attend, DM me for details! I'll be in Berkeley until December as a Project Scientist at @LBNLcs and then I'll move to @CornellCIS as an Assistant Professor starting in January.

@giuliaguidi

Giulia Guidi

2 years

PhD Graduation Ceremony | @UCBerkeley Engineering Commencement — May 18, 2022

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@giuliaguidi

Giulia Guidi

2 years

Twitter please stop and look how cute my dog is

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@giuliaguidi

Giulia Guidi

4 years

How it started: How it’s going:

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@giuliaguidi

Giulia Guidi

4 years

End the (what a) year on a high note: Our paper on how to build a overlap graph and perform transitive reduction on it in distributed memory using sparse matrices has been accepted to #IPDPS ’21: . GG, O. Selvitopi, M. Ellis, L. Oliker, @KathyYelick , @aydoz

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@giuliaguidi

Giulia Guidi

11 months

Our paper “Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the #Graphcore IPU” has been featured in the @CornellNews and it'll be presented at @Supercomputing #SC23 by Luk Burchard on November 14: #HPC

Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU | Procee...

@CornellNews

Cornell Chronicle

11 months

Better genome assembly — through AI? A hardware accelerator, developed for #ArtificialIntelligence operations, can speed up alignment of protein and DNA molecules, making the process up to 10 times faster than current methods. @CornellCIS @Supercomputing

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@giuliaguidi

Giulia Guidi

5 years

Our paper "LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment" got into #IPDPS20 ! Our implementation achieves up to 181.6 GCUPS improving an application runtime by up to 10.6x. @AlbertoZeni , GG, M. Ellis, N. Ding, @santambr , S. Hofmeyr, @aydoz , L. Oliker, @KathyYelick

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@giuliaguidi

Giulia Guidi

1 year

Summer in Ithaca ☀️

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@giuliaguidi

Giulia Guidi

2 years

"You know," (s)he said, "sometimes all you need is 20 seconds of insane courage [to write the first sentence of a paragraph or section]. Just literally 20 seconds of embarrassing bravery [to write down some half-baked ideas]. And I promise you, something great will come of it."

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@giuliaguidi

Giulia Guidi

3 years

Hope your Sunday is going well

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@giuliaguidi

Giulia Guidi

2 years

Can’t get tired of this view @LBNLcs

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@giuliaguidi

Giulia Guidi

2 years

Gotta say this laptop stand is pretty good — 5 ⭐️

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@giuliaguidi

Giulia Guidi

2 years

The therapist should pay me for the entertainment

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@giuliaguidi

Giulia Guidi

2 years

I'm very happy to announce our paper "Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly" has been accepted at @icpp_conf 2022! CC: Gabriel Raulet, @DanRokhsar , Lenny Oliker, @KathyYelick , and @aydoz 1\n

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@giuliaguidi

Giulia Guidi

5 years

I was looking forward #GI2019 to catch up with friends and talk about our recent work on long-read overlap detection and alignment via sparse-matrix multiplication. Unforeseen circumstances are preventing me to attend —I know Twitter will help me to keep on top of things, though!

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@giuliaguidi

Giulia Guidi

2 years

This is the first time in my life that someone has made a personalized cake for me and I couldn’t be happier— @mbpmilano , you’re the absolute best!

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@giuliaguidi

Giulia Guidi

5 months

Commute to work 😏

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@giuliaguidi

Giulia Guidi

2 years

I’ll be recruiting students! I’m interested in parallel algorithms (OpenMP, MPI, CUDA, HIP, etc.) for genomics, in particular using combinatorics and high-level primitives, as well as in #HPC in the cloud and building scalable data analytics infrastructures across systems. 5/n

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Giulia Guidi

1 year

Cappuccino at noon in Italy — they’re about to rip my passport

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@giuliaguidi

Giulia Guidi

4 years

One thing I learned in grad school is to ask stupid questions. Because there’s a good chance they are not stupid at all —and if they are, you have just learned something anyway.

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@giuliaguidi

Giulia Guidi

2 years

I'm very pleased to have been invited to give a talk at the minisymposium on Combinatorial Scientific Computing at @TheSIAMNews Conference on Computational Science and Engineering (CSE) 2023. Looking forward to being in Amsterdam next February!

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Giulia Guidi

2 years

I saw compassion (or pity?) this morning in the eyes of passersby watching me shovel snow in the driveway where my car with California plates was parked.

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@giuliaguidi

Giulia Guidi

3 years

Given how many times I repeated this just in the past week, here’s a thread on where to find good Italian food in the Bay Area 🙃1/n

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@giuliaguidi

Giulia Guidi

2 years

ACM @SIGHPC Computational and Data Science Fellows 2020, 2021, and 2022 at #SC22 — full house!

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@giuliaguidi

Giulia Guidi

2 years

I was talking today with an Italian graduate student who is also graduating this summer, and apparently, we were both introduced to research in northern Italy after being brutally dumped by our once-upon-a-time partner. Research as a cure for a broken heart.

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@giuliaguidi

Giulia Guidi

3 years

I'm happy to start this semester by saying I have been invited to give a lecture for the "Graph Algorithms in the Exascale Era" minisymposium @TheSIAMNews Conference on Parallel Processing for Scientific Computing on Feb 23—hope to see you in Seattle, pandemic permitting.

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@giuliaguidi

Giulia Guidi

4 years

Got my 2nd dose yesterday and just got the news that both my grandmas and my mom have a vaccine appointment in the next week or so —I can now really enjoy a little fever and a couch potato day

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@giuliaguidi

Giulia Guidi

2 years

To Italian computer science 💻 students interested in continuing their academic career in the US: DM if you are interested in joining a Slack workplace for 🇮🇹 researchers in the 🇺🇸 or for 🇮🇹 researchers abroad interested in continuing their career in the 🇺🇸.

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@giuliaguidi

Giulia Guidi

1 year

I am honored I have been invited to contribute to International Journal of Orthodontics because of my invaluable expertise and contribution to this field. Great job me!

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@giuliaguidi

Giulia Guidi

3 years

I am very pleased to say that today—for the first time in my life—I have written Wednesday from scratch without misspelling it.

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@giuliaguidi

Giulia Guidi

1 year

Lecture hall @UniTrento_DISI 🏔️

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@giuliaguidi

Giulia Guidi

3 years

A student just sent me a very nice email thanking me for my teaching (assistantship), and man, I'm going to print it out, frame it, hang it on the wall right behind my laptop, and read it out loud several times a day.

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@giuliaguidi

Giulia Guidi

2 years

Driving across the country from California to New York during winter I’m completely reevaluating temperatures — I’m now happy to see the car thermostat showing 30F

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@giuliaguidi

Giulia Guidi

4 years

Today is Father's Day in Italy - I haven't seen mine in exactly 425 days. I can't wait to hug my family again. But for now I just wish them vaccinated and safe, we'll make up for lost time. I miss you & I love you.

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@giuliaguidi

Giulia Guidi

2 years

A fiend just sent me this and it’s so gorgeous—Can’t wait to be in Ithaca tomorrow to catch up with @CornellCIS colleagues for the rest of week and do some leaf peeping!

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@giuliaguidi

Giulia Guidi

1 year

I climbed a mountain over the weekend for the first time! 🙃

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@giuliaguidi

Giulia Guidi

2 years

SF pride 2022 🌈

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@giuliaguidi

Giulia Guidi

2 years

Just another morning walk in Ithaca

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@giuliaguidi

Giulia Guidi

3 years

Love this pic from my last trip to Italy (Jan 2020) —Grandma for scale.

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@giuliaguidi

Giulia Guidi

5 months

Two years ago today! Time flies! ⁦ @aydoz ⁩ ⁦ @KathyYelick ⁩

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@giuliaguidi

Giulia Guidi

2 years

Dating another academic be like “following up on our discussion last night, here’s a Google Doc summarizing our vacation plan” via email

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@giuliaguidi

Giulia Guidi

2 years

10 days to apply to the Equal Access to Application Assistance program at @Berkeley_EECS ! It's an excellent opportunity to get feedback on your PhD application before submitting it—RTs are welcome!

@cathychen23

Catherine Chen

2 years

If you are a prospective PhD student applying to @Berkeley_EECS , you can submit your application to EAAA for feedback until October 8th 2022 (ten days from today)!

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@giuliaguidi

Giulia Guidi

2 years

I had a nightmare last night. I dreamt that classes were starting soon and the chair told me I had to teach a second class, a “surprise” class on a topic only tangentially related to my research. That class was scheduled for 7 am on Fridays.

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@giuliaguidi

Giulia Guidi

1 year

I'm preparing the schedule and material for the advanced parallel computing course I'll be teaching in the fall, and I have no idea how to fit so much cool stuff into 15 weeks. Please send good vibes and decision-making capacity.

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@giuliaguidi

Giulia Guidi

3 years

I'm very excited to be a speaker for the "Graph Algorithms in the Exascale Era" minisymposium! Come by tomorrow, 1pm for Part I and 3 pm for Part II (PDT). #MS19 #SIAMPP22

@mminutoli84

Marco Minutoli

3 years

PSA: There is a very interesting mini at #SIAMPP22 on "Graph Algorithms in the Exascale Era" with a great line up of speakers that will talk about very exciting graph problems. You don't want to miss it. #MS19

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Giulia Guidi

3 years

I'm looking forward to visiting @EPFL next week and giving a talk at @ICepfl (18 Aug, 10:15 CET, room BC 420) entitled "Sparse Matrices and High-Performance Computing Meet Biology" —meet me there if you're around and curious ;) tips on what to visit in Lausanne are very welcome!

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@giuliaguidi

Giulia Guidi

3 years

Higher salaries for grad students because I have to adopt more dogs.

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@giuliaguidi

Giulia Guidi

2 years

God I’m way past the age I can take a 5am flight and be alright. I lost 10 years of life when the alarm went off at 2.30am and it’ll take me 48h to recover—apologies to whoever will have to interact with me today and tomorrow.

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Giulia Guidi

2 years

How do I tell my California native dog that doesn’t want to pee in the rain that we’re moving to New York in less than a month?

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@giuliaguidi

Giulia Guidi

3 years

University sent me $12.60 of financial aid refund —Thank you?

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@giuliaguidi

Giulia Guidi

3 years

Apparently, my family is coming to California for the holidays and they’re bringing the rain with them from Northern Italy—I apologize on their behalf.

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@giuliaguidi

Giulia Guidi

1 year

Ithaca's Cascadilla Gorge Trail — Can't beat this commute to work (and it's getting better as summer approaches)

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@giuliaguidi

Giulia Guidi

3 years

emailing is a full time job

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Giulia Guidi

2 years

Do you think I’m ready for a latte art competition?

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@giuliaguidi

Giulia Guidi

2 years

I am not crying 🙃 I’m pretty sure I would not be here without the guidance of the right PhD advisor(s)! PhD advisor > University

@aydoz

Aydın Buluç

2 years

Giulia has done so many things right that one day I hope to use her time in Berkeley as a primary example in a “how to succeed in grad school” presentation. It has been a real pleasure working with you so far, @giuliaguidi . Cornell is lucky to have you.

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Giulia Guidi

2 years

Here until Friday! Then, here until undefined starting January!

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Giulia Guidi

4 years

Getting a dog has been the best decision I've made since I started grad school —we can discuss my general decision-making ability another time. Grad students, adopt a puppy/kitty, you'll thank me later. Here's my fav shelter in the Bay Area @MiloFoundation .

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@giuliaguidi

Giulia Guidi

2 years

It’s needless to say that I’m so grateful for the guidance that @aydoz and @KathyYelick gave me throughout my PhD and for the support from @DanRokhsar and many @Berkeley_EECS and @LBNLcs colleagues—I also want to thank @polimi and @necstlaboratory for initiating my career. 2/n

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Giulia Guidi

2 years

TGIF

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Giulia Guidi

3 years

Glad to find out—today—that my 12/28/21 COVID test is negative, what a relief

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@giuliaguidi

Giulia Guidi

5 years

Our paper "LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment" is now available on @arxiv : . Our code is publicly available on @github : .

GitHub - albertozeni/LOGAN: LOGAN: High-Performance Multi-GPU X-Drop Long-Read Alignment.

LOGAN: High-Performance Multi-GPU X-Drop Long-Read Alignment. - albertozeni/LOGAN

@giuliaguidi

Giulia Guidi

5 years

Our paper "LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment" got into #IPDPS20 ! Our implementation achieves up to 181.6 GCUPS improving an application runtime by up to 10.6x. @AlbertoZeni , GG, M. Ellis, N. Ding, @santambr , S. Hofmeyr, @aydoz , L. Oliker, @KathyYelick

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Giulia Guidi

2 years

Sieger sent this handsome boy to keep me company and give me love and support while he watches over us from puppy heaven—welcome to the pack, Mahler!

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@giuliaguidi

Giulia Guidi

2 years

ExaBiome @LBNLcs representatives at #SC22 during the Award Ceremony!

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Giulia Guidi

3 years

Dude the pain of cross-compiling MPI and CUDA

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@giuliaguidi

Giulia Guidi

2 years

Ithaca at last!

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@giuliaguidi

Giulia Guidi

2 years

3 months old 💘 I’ll need a gym subscription if I want to keep carrying him around

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@giuliaguidi

Giulia Guidi

1 year

I was thinking about the $20 bongo burger sandwich I often had for lunch in grad school yesterday when eating perfectly cooked spinach spätzle with speck for $12 in front of the CS department in Trento.

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@giuliaguidi

Giulia Guidi

2 years

mid-July vs today

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@giuliaguidi

Giulia Guidi

1 year

Come on, seriously? This? 10’ walk from home? 😍

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@giuliaguidi

Giulia Guidi

3 years

I'm not sold on pair programming, but pair debugging is the real deal. Going on a bug hunt with a buddy is so much better.

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@giuliaguidi

Giulia Guidi

2 years

@sk_census @astrowizicist I luckily realized that before calling the cops but I did panic big time for 20 minutes!

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@giuliaguidi

Giulia Guidi

2 years

Unrelated, New Mexico is pretty cool

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@giuliaguidi

Giulia Guidi

3 years

Quite accurate

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