Ankit Gupta Profile
Ankit Gupta

@GuptaAnkitV

1,675
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339
Statuses

head of ai @ginkgo . co-founder of @reverielabs (acquired). @harvard CS. @ycombinator w18.

Cambridge, MA
Joined November 2015
Don't wanna be here? Send us removal request.
@GuptaAnkitV
Ankit Gupta
6 months
Super excited to announce Reverie Labs’s acquisition by @Ginkgo Bioworks!! It’s been an incredible 6 year adventure of building a pharma company at the intersection of AI and biology, and I could not be more excited to continue that vision at Ginkgo. 1/ ( 🧵👇!!)
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@GuptaAnkitV
Ankit Gupta
2 months
Calling all Bio x ML enthusiasts — join me at @icmlconf in Vienna! I'll be co-hosting a lunch with @GoogleAI on July 24 for researchers, founders, students, and investors in the techbio world. Join for great food and meet your peers. DM me for an invite!
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@GuptaAnkitV
Ankit Gupta
4 years
Exciting news today - Reverie has raised a $25M Series A! I'm immensely grateful and proud of the incredible team that got us here, and so excited for what lies ahead in our journey to cure diseases with computation.
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@GuptaAnkitV
Ankit Gupta
1 month
Visiting SF this week to meet with teams building in AI x Bio. DM if you'd like to meet up. I'm keen to expand the number of teams I can enable with data and/or compute.
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@GuptaAnkitV
Ankit Gupta
6 days
Visiting NYC this week and would love to meet with teams building in AI x Bio. DM if you'd like to meet up - I’m around after Labor Day. Our team at Ginkgo is building foundation models in biology and would love to partner on data generation or compute.
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@GuptaAnkitV
Ankit Gupta
4 years
Super pumped to be starting this new phase @reverielabs with an awesome partner! Many thanks to the folks at Roche and Genentech for trusting us with these programs, and I’m truly excited to start this collaboration!
@reverielabs
Reverie Labs
4 years
Reverie Labs enters multi-target collaboration agreement with Roche.
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@GuptaAnkitV
Ankit Gupta
2 months
My team at @Ginkgo has been building large scale biological foundation models and partnering with biotechs/pharma companies on data generation for AI, so I'm excited to meet the Bio x ML community from across the world.
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@GuptaAnkitV
Ankit Gupta
2 months
Excited to be in Vienna for @icmlconf 2024 - come find me first thing Tuesday to see a sneak peek into @Ginkgo 's ML team at the @GoogleAI booth at 10am. Looking forward to meeting everyone!
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@GuptaAnkitV
Ankit Gupta
6 years
We're hiring at Reverie Labs! If you have a machine learning background and are looking to join a team of fellow ML researchers/engineers to build the future of drug discovery, I'd love to chat!
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@GuptaAnkitV
Ankit Gupta
4 years
Super excited for our unique team of engineers and chemists to partner with organizations like @Roche and @Genentech as we work to fight disease with computation! Check out @ReverieLabs 's profile in @Forbes for more how our focus on kinases is a perfect match for computation.
@reverielabs
Reverie Labs
4 years
We’re so excited to partner with incredible companies like @Roche as we execute our mission of using computation to fight disease (and to finally announce our seed round)!
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@GuptaAnkitV
Ankit Gupta
6 years
Votes have consequences folks
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@GuptaAnkitV
Ankit Gupta
4 years
Getting rid of H1B visas is stupid, racist, and anti-American, and if you support this you are stupid, racist, and anti-American. The only thing this will accomplish is move a massive number of American jobs overseas. China, India, and Europe just got another reason to laugh.
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@GuptaAnkitV
Ankit Gupta
1 year
Finally following through on one of my resolutions for the year and bringing back my old blog. First, a light request to ask open source ML developers to release their models in containers, and a user guide to do so with an example in protein folding:
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@GuptaAnkitV
Ankit Gupta
3 years
So proud of the one and only @LucyLNam !!! Boston’s got an incredible surgeon joining the ranks!
@MGHSurgery
Mass General Surgery
3 years
It's finally here— #MatchDay ! We are absolutely thrilled to welcome the 2021 #MGHsurgery interns 🎉 For all that you've accomplished so far and for all that is yet to come, congratulations! We look forward to welcoming you on campus very soon.
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@GuptaAnkitV
Ankit Gupta
5 years
Reverie is launching an engineering blog where we are sharing some of the tools and methods we use to power our therapeutics programs. Check it out and let me know what you think!
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@GuptaAnkitV
Ankit Gupta
7 years
Wrote a post summarizing the differences between two v interesting ICLR submissions doing unsupervised neural machine translation with only monolingual corpora. Check it out at !
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@GuptaAnkitV
Ankit Gupta
2 years
Super grateful for the recognition and for all the great people I get to work with at @reverielabs !! 🥂🥂🥂
@reverielabs
Reverie Labs
2 years
We are very excited to announce that our co-founders @jonahkallenbach and @GuptaAnkitV have been named to the 2023 Forbes 30 under 30 list for Healthcare!
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@GuptaAnkitV
Ankit Gupta
4 years
We're hiring again at @ReverieLabs ! We're looking for a motivated Molecular Data Scientist to join us at the intersection of chemistry and computer science and extract insights from some of the largest chemistry datasets in the world.
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@GuptaAnkitV
Ankit Gupta
5 years
Just co-published a post with the AWS blog on how @reverielabs uses Docker to power our ML training and inference stack. Thanks to the @awscloud team for the help and let me know what you think!
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@GuptaAnkitV
Ankit Gupta
4 years
Very excited to share a new post on the @ReverieLabs blog. In it, Sophia describes how we built a central repository to store x-ray crystallography data to support hybrid workflows in computational chemistry and machine learning. Also, we're hiring!
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@GuptaAnkitV
Ankit Gupta
5 years
Reverie is now hiring front-end engineers! If you want to use Javascript to help cure cancer, please reach out!
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@GuptaAnkitV
Ankit Gupta
6 months
I'll be in SF next week for @NVIDIAGTC . if you're around and want to talk foundation models / biology, dms are open!!
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@GuptaAnkitV
Ankit Gupta
4 years
A natural representation for molecules with atoms as nodes, bonds as edges. Combine this with the ability to do massive-scale pre-training and very fast inference, and things start to work at the scale needed for small molecule drug discovery (running inference on 10^9 cmpds)
@roydanroy
Dan Roy
4 years
What's the coolest/clearest application of graph neural networks?
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@GuptaAnkitV
Ankit Gupta
4 years
Such an honor to be on this podcast with @anikagupta18 today! I know that ML for drug discovery probably isn’t what’s on everyone’s minds today, but do reach out if you have any thoughts or questions :)
@anikagupta18
Anika Gupta
4 years
Happy election day! In today's episode of The Data Pulse, @GuptaAnkitV , CTO of @reverielabs , talks about systematization as key to applying machine learning for small molecule drug discovery. 1/2
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@GuptaAnkitV
Ankit Gupta
6 months
4/ I’m incredibly pleased to be joining Ginkgo alongside Reverie’s AI team as Head of AI/ML Advancement and Senior Director of ML Research. I’ll be training big models, and working with pharma, compute, academic partners to make new discoveries and unlock new business.
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@GuptaAnkitV
Ankit Gupta
10 days
If you’re not sure whether you should apply, you should apply. Writing the application itself is a useful process!
@daltonc
Dalton Caldwell
18 days
The application deadline for the YC Fall 2024 batch is in 8 days
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@GuptaAnkitV
Ankit Gupta
6 months
2/ Ginkgo is building the rare biopharma platform that aims to level-up the entire industry. In doing so, they’ve built the engine — they call it the Foundry — to generate the data that’ll power the next generation of powerful AI models in biology.
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@GuptaAnkitV
Ankit Gupta
6 months
6/ Thank you also to our investors, specially @ycombinator who first took a chance on us and always supported us, and eventually others including @neo , @firstround , @WireframeVC , and Ridgeback.
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@GuptaAnkitV
Ankit Gupta
5 years
@chipro Write the pseudocode for the major operations that nn.Linear/tf.matmul implement during forward/backward passes (in vector notation and then numpy). Pretty good signal for whether they actually understand backprop.
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@GuptaAnkitV
Ankit Gupta
2 months
I'd also love to give back to the community for all the guidance I got in building my first ML startup. If I can be a helpful resource for anyone at @icmlconf working on an ML company or considering starting one, I'd be happy to chat. Calendly here:
@GuptaAnkitV
Ankit Gupta
2 months
Excited to be in Vienna for @icmlconf 2024 - come find me first thing Tuesday to see a sneak peek into @Ginkgo 's ML team at the @GoogleAI booth at 10am. Looking forward to meeting everyone!
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@GuptaAnkitV
Ankit Gupta
4 years
major fan of The Y Combinator
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@GuptaAnkitV
Ankit Gupta
6 months
3/ I’m excited to see our machine learning technologies bring new state of the art models in protein and nucleic acid design. We’ll be training the next generation of foundation models for important tasks in biology.
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@GuptaAnkitV
Ankit Gupta
6 months
5/ I want to thank so many people along the way — first and foremost: our incredible team, with whom I’ve had the utmost privilege of working. Most importantly, I want to thank my cofounder @jonahkallenbach , who has always seen eye to eye, and who I can’t wait to work with again.
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@GuptaAnkitV
Ankit Gupta
2 years
We've got a new post on the Reverie Engineering Blog! Check out Stephen's work using asyncio to scale the ML inference workloads for our therapeutic programs at @reverielabs
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@GuptaAnkitV
Ankit Gupta
6 months
10/ Can’t wait to build new things ahead. Catch me around Boston if you want to chat AI x Biology, or…. maybe see you at an upcoming ML conference or two. I'm about to have 100x more compute than before, so if you'd like to work together, reach out!
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@GuptaAnkitV
Ankit Gupta
5 years
Reverie Labs is hiring software engineers! Come join us to build the infra that powers the next generation of life-saving cures!
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@GuptaAnkitV
Ankit Gupta
6 years
Throw out the hyperparameters that don't spark joy
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@GuptaAnkitV
Ankit Gupta
6 years
@colinraffel N+1) realize random forest is better
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@GuptaAnkitV
Ankit Gupta
4 years
Oh and by the way, I'm hiring engineers (full stack, front-end, ML, data science, or anything in between)! Reach out if interested or apply at !
@GuptaAnkitV
Ankit Gupta
4 years
Super excited for our unique team of engineers and chemists to partner with organizations like @Roche and @Genentech as we work to fight disease with computation! Check out @ReverieLabs 's profile in @Forbes for more how our focus on kinases is a perfect match for computation.
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@GuptaAnkitV
Ankit Gupta
4 years
Another exciting opening at @ReverieLabs ! We're hiring a Senior/Staff Software Engineer to help us build our modern, internal web platform that powers our drug discovery programs. Please DM or apply if interested!
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@GuptaAnkitV
Ankit Gupta
6 years
Excited to share a little bit of what we've been working on!
@TechCrunch
TechCrunch
6 years
Reverie Labs uses new machine learning algorithms to fix drug development bottlenecks by @catherineshu
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@GuptaAnkitV
Ankit Gupta
6 years
We're hiring! Please reach out or apply at the link if interested!
@reverielabs
Reverie Labs
6 years
Reverie Labs is hiring a computational chemist in Cambridge MA! At Reverie we put computation at the center of drug discovery, and you will be an essential part of that process. DM me or apply at:
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@GuptaAnkitV
Ankit Gupta
4 years
Can the two dudes commentating on this @usopen match shut up about how much female tennis players yell and talk about... idk... tennis? or better yet just not be there
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@GuptaAnkitV
Ankit Gupta
4 years
Is the fly female and what does pence's wife think
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@GuptaAnkitV
Ankit Gupta
4 years
1/ This is great and all, but come on NPR did you have to pick a cover photo with a guy holding an Indian flag and not an American one? We're just as patriotic as anyone else - no need to make it seem like we care more about India or that it's unusual we don't.
@nprpolitics
NPR Politics
4 years
Indian Americans — a small but possibly pivotal voting bloc — are overwhelmingly voting for Joe Biden this election, a new survey finds.
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@GuptaAnkitV
Ankit Gupta
6 months
Also want to give a special thanks to @jrkelly and @AnnaMarieWagner for their support. We met Jason through YC many years ago, and I'm thrilled to be working closely with them in this next chapter.
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@GuptaAnkitV
Ankit Gupta
4 years
If I’m understanding it right, the US Citizenship Act of 2021 would be game changer for STEM in American businesses - F1 OPT renewals until green card rather than H1B lottery is a critical (and obvious) step in the right direction for a labor force we desperately need
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@GuptaAnkitV
Ankit Gupta
4 years
@srush_nlp Docker + Terraform are magic for this. you can write down all the config once and not have to think about it. Imo docker is ideal for demos so your users don’t need to install anything (except docker). Works well with GPUs nowadays
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@GuptaAnkitV
Ankit Gupta
7 years
ML debugging fun - 1. Loss function weirdly keeps converging to .6931 2. Notice that .6931 looks familiar. 3. 🤔 4. .6931 = log(2) 5. log(2) = softplus(0) 6. 😀!
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@GuptaAnkitV
Ankit Gupta
13 days
Can confirm @Neo helped make several of the best new grad hires at @reverielabs . An excellent community!
@apartovi
Ali Partovi
13 days
@bznotes At @Neo , we publicly display names & faces of the engineers we helped startups hire. Many of our startups hired half their early team through Neo. Our recruiting platform is so good that OpenAI (ChatGPT) used it to hire all their 2024 new grads.
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@GuptaAnkitV
Ankit Gupta
6 months
7/ As any founder knows, at times this job is absolutely brutal. In those moments, so many peers — professional and personal — stepped up to keep me afloat. To other founders, if I can be a useful sounding board to whatever you’re dealing with, please reach out.
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@GuptaAnkitV
Ankit Gupta
3 years
An awesome new blog post by the inimitable @ElanaPearl ! Follow along as she shows how we use UMAP to build valuable visualizations and preprocessing tools.
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@GuptaAnkitV
Ankit Gupta
6 months
9/ Finally, my family. My parents encouraged me when I was unsure about leaving a more stable path, and I'm so grateful for them. Most of all, my wife @LucyLNam , who is my biggest supporter. The worst work days were tolerable and the best ones were glorious with her in my life.
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@GuptaAnkitV
Ankit Gupta
4 years
We're releasing our SMILES tokenizer and a full Colab walkthrough that uses the Transformer architecture on chemistry data using Tensor2Tensor. Let us know what you think!
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@GuptaAnkitV
Ankit Gupta
4 years
The single most useful thing the new administration can do on day 1 to help a growing business like @reverielabs : Give every person in the H1B lottery and green card queues from the last decade their work authorization.
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@GuptaAnkitV
Ankit Gupta
1 year
Not the strongest start from @Google Bard, tough
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@GuptaAnkitV
Ankit Gupta
4 months
1/ Alphafold 3 is out! Awesome work, lots of interesting model-simplifying discoveries, and cool methods for distillation and fine-tuning. That said, since many will probably try to match AF3 on their chosen benchmarks, id like to evaluate some of their shortcomings. 🧵👇
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@GuptaAnkitV
Ankit Gupta
5 years
"She was allowed to enter ... after the Mar-a-Lago security manager on duty verified that her last name matched the surname of a member of the club". That's the verification process? So anyone with the last name Zhang can just waltz into Mar a Lago?
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@GuptaAnkitV
Ankit Gupta
4 years
How many levels of 25th amendment invocations are needed to make Fauci president?
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@GuptaAnkitV
Ankit Gupta
6 years
For those biting their nails about Florida right now, this is a huge deal for the next one!!
@PodSaveAmerica
Pod Save America
6 years
Another big win: Amendment 4 in Florida has passed. More than 1 million people who were formally incarcerated will have their right to vote restored!
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@GuptaAnkitV
Ankit Gupta
3 years
So proud of you! Your patients are very lucky 🩺
@LucyLNam
Lucy Nam, MD
3 years
Grateful to be Lucy Nam, MD. Thank you @hopkinsmedicine . Speechless with gratitude 🙏🏼
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@GuptaAnkitV
Ankit Gupta
6 years
Merry Christmas!
he's makin a list it's kept in plain text an elf just got phished you know what is next santa claus has leaked 2.2 billion user's names, addresses, naughty/nice statuses, and the times they are asleep in their homes
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@GuptaAnkitV
Ankit Gupta
5 years
We're now hiring DevOps engineers - if you like building cloud infra and want to power drug discovery, please reach out!
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@GuptaAnkitV
Ankit Gupta
5 years
Wow I'm jealous of my NYC friends only because jury duty in the Southern District of New York must be so entertaining these days
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@GuptaAnkitV
Ankit Gupta
5 years
Literally what
@BleacherReport
Bleacher Report
5 years
Nadal. UNBELIEVABLE. Tiger loves it as Rafa moves on to the US Open quarterfinal 🔥 (via @usopen )
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@GuptaAnkitV
Ankit Gupta
4 years
lmao that I used to go to swim practice in middle school where Drake shot this:
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@GuptaAnkitV
Ankit Gupta
4 years
yiiiiiikes
@Tennis
TENNIS
4 years
BREAKING: World No. 1 Novak Djokovic has been DEFAULTED from the #USOpen , during the first set of his match against Pablo Carreno Busta, after a ball he hit toward the baseline struck a linesperson.
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@GuptaAnkitV
Ankit Gupta
6 months
8/ I've been blessed to have my community throughout this adventure. These are the ones that gave me company when I was down or checked in when a big moment arrived. ty especially to @krutibvora , @rahulg603 , @KristinTsuo and many others who stubbornly refuse to get on twitter.
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@GuptaAnkitV
Ankit Gupta
9 months
New post up on my personal blog, this time some benchmarks in running @PyTorch 's gpt-fast on a few-years-old consumer GPU. Fun stuff getting the model to fit on a tiny (by today's standards) GPU.
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@GuptaAnkitV
Ankit Gupta
4 years
When I left Oregon for college I was surprised to find that everywhere else didn’t do the extremely obvious and secure thing we did at home: Vote by mail. Call your representatives now to make this happen.
@stengel
Richard Stengel
4 years
Voting is the primary right by which our other rights are secured. Because of Covid-19, the 2020 election won't look like any other. Voting by mail must be an option for every American. States need to start on this now. Cost should be included in stimulus.
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@GuptaAnkitV
Ankit Gupta
6 years
I’m a big supporter of a lot of your positions @AOC and I support the underlying desire here - to use pharma profits to fund pubic science - but this position needs a bit more nuance.
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@GuptaAnkitV
Ankit Gupta
3 months
anyone have a product for monetizing ML models? Say Iv got a proprietary LLM and a k8s cluster to run it on in my cloud provider. Looking for a service that handles signing up external users, creating API + keys, tracking token usage, billing customers, etc. any recs?
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@GuptaAnkitV
Ankit Gupta
4 years
Very excited to share a new open position at @ReverieLabs ! We're hiring a motivated project manager to enable our therapeutic programs to be more organized, efficient and effective. Come join us and work with a world-class team of chemists and engineers!
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@GuptaAnkitV
Ankit Gupta
6 months
@srush_nlp This was a helpful read when I recently explored this re some of the code portability challenges
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@GuptaAnkitV
Ankit Gupta
4 years
yet another reminder that the American system for healthcare coverage is (pretty much uniquely) designed to exacerbate this crisis
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@GuptaAnkitV
Ankit Gupta
5 years
And finally why does anyone invite Chuck Todd to literally anything?
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@GuptaAnkitV
Ankit Gupta
5 years
Got a voicemail today from @djkhaled
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@GuptaAnkitV
Ankit Gupta
5 years
. @Microsoft can you unbrick Github before you create AGI
@MSFTnews
Microsoft News and Stories
5 years
. @Microsoft  invests $1 billion in  @OpenAI partnership, founded on shared values of trustworthiness and empowerment, to accelerate AI innovation and help OpenAI deliver on the promise of artificial general intelligence.
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@GuptaAnkitV
Ankit Gupta
3 years
If you love recruiting and developing an amazing team, please reach out!
@jonahkallenbach
Jonah Kallenbach
3 years
Reverie is hiring a Head of People! If recruiting and supporting an exceptional, diverse group of people at a rapidly growing therapeutics company sounds fun, my DMs are open :)
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@GuptaAnkitV
Ankit Gupta
5 years
The indefatigable Lucy out with more amazing work! So proud!!
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@GuptaAnkitV
Ankit Gupta
5 years
Another blog post up! @gabe_grand shares how we rapidly build internal web applications that enable us to develop therapeutics with our machine learning models. Check it out!
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@GuptaAnkitV
Ankit Gupta
1 year
Very excited to have Valarie on board!
@jonahkallenbach
Jonah Kallenbach
1 year
I’m delighted to announce that we have hired Valarie Truax, Ph.D., M.B.A. as VP of Business Development and Corporate Strategy at @reverielabs !
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@GuptaAnkitV
Ankit Gupta
4 years
biotech twitter, what's the deal with Egnyte? Why do companies seem to prefer it over Dropbox, Box, Google Drive etc? It seems great, but so do the others. What's the killer feature it has that others don't?
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@GuptaAnkitV
Ankit Gupta
4 years
. @SenatorBurr should resign, and if our system worked correctly, go to prison.
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@GuptaAnkitV
Ankit Gupta
4 years
Super excited that @Neo is launching Startup Connect - Can't wait to meet CS students there with @ReverieLabs !
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@GuptaAnkitV
Ankit Gupta
5 years
Who would have thought that amassing and exploiting vulnerabilities for years was an awful idea?
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@GuptaAnkitV
Ankit Gupta
4 years
@rbhar90 strongly recommend all the way for this @rbhar90 . We use this for all of our infra at @reverielabs . Two commands to deploy our entire tech stack.
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@GuptaAnkitV
Ankit Gupta
4 years
6/ So anyways, our little voting bloc is probably not going to decide this election. But we better be on the correct side of history. And to the gerontocracy running this world, watch out we're coming for your jobs
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@GuptaAnkitV
Ankit Gupta
1 month
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@GuptaAnkitV
Ankit Gupta
4 years
@joshk @reverielabs @JonahCallinBack Couldn't be more grateful for your and @firstround 's support!
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@GuptaAnkitV
Ankit Gupta
4 years
5/ And relatedly, it has been exciting to see political participation grow (maybe as a result of that!). My parents have always voted, but until this year they'd never gone out of their way to turn out others in faraway swing states
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@GuptaAnkitV
Ankit Gupta
4 years
oh shit
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@GuptaAnkitV
Ankit Gupta
4 years
@jpochtar Yeah, easy to say something was going to be efficacious and safe in hindsight. And pretty illogical to say it when mRNA vaccines have been used 0 times in the past. Also weird to compare to polio which had WAY higher morbidity for an infected person.
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@GuptaAnkitV
Ankit Gupta
5 years
@ my fellow Asian-Americans who want to improve college admissions, plz direct your attention at this instead of dismantling affirmative action
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@GuptaAnkitV
Ankit Gupta
4 years
Since Congress is in fake recess for the next few months can we take away all of their health insurance? Seems to be the ~American Way~. /s
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@GuptaAnkitV
Ankit Gupta
5 years
If you're interested in YC and in the Boston area, a partner is hosting office hours at Harvard this Tuesday. Check it out and let me know if you have any questions:
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@GuptaAnkitV
Ankit Gupta
5 years
Unreal level of shade here
@ewarren
Elizabeth Warren
5 years
It's always a good day to be reminded that I got where I am because a great education was available for $50 a semester at the University of Houston (go Cougars!). We need to cancel student debt and make college free for everyone who wants it.
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@GuptaAnkitV
Ankit Gupta
6 years
A fantastic writeup from a close friend and excellent researcher!
@tomssilver
Tom Silver
6 years
Lessons from My First Two Years of AI Research
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